STRINGSTRING
R2601_06093 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_06093" - Probable oxidoreductase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_06093Probable oxidoreductase (429 aa)    
Predicted Functional Partners:
R2601_18690
Sarcosine oxidase alpha subunit (996 aa)
   
  0.985
R2601_10189
Sarcosine oxidase, alpha subunit family protein (1012 aa)
   
  0.985
R2601_06088
Putative dihydrodipicolinate synthase (136 aa)
              0.859
R2601_00255
FAD linked oxidase (946 aa)
   
  0.842
gcvP
Glycine dehydrogenase (aminomethyl-transferring) ; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein (948 aa)
     
 
  0.839
R2601_16630
2,4-dienoyl-CoA reductase (669 aa)
   
  0.813
R2601_01613
2,4-dienoyl-CoA reductase (NADPH) protein (678 aa)
   
  0.813
R2601_16335
Uncharacterized protein (557 aa)
   
  0.804
R2601_16720
L-threonine aldolase, low-specificity, putative (359 aa)
   
 
    0.802
R2601_13334
Uncharacterized protein (405 aa)
   
  0.800
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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