STRINGSTRING
R2601_06103 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_06103" - Putative NAD dependent epimerase/dehydratase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_06103Putative NAD dependent epimerase/dehydratase (318 aa)    
Predicted Functional Partners:
R2601_04743
Mannose-6-phosphate isomerase, type II (477 aa)
   
  0.955
R2601_06098
3-ketoacyl-(Acyl-carrier-protein) reductase (258 aa)
   
  0.935
R2601_15552
UDP-glucose pyrophosphorylase (297 aa)
 
   
  0.906
R2601_06113
Uncharacterized protein (433 aa)
   
        0.861
R2601_06118
Uncharacterized protein (186 aa)
              0.859
R2601_06108
Amidohydrolase family protein (480 aa)
              0.859
R2601_17299
UDP-glucose 4-epimerase (301 aa)
 
   
    0.853
R2601_15547
UDP-glucose 4-epimerase (327 aa)
 
0.805
R2601_10414
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (350 aa)
   
 
    0.783
R2601_14955
Nucleotidyltransferase family protein (226 aa)
 
 
  0.775
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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