STRINGSTRING
R2601_06143 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_06143" - Putative two-component response regulator in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_06143Putative two-component response regulator (209 aa)    
Predicted Functional Partners:
R2601_06138
Probable sensor histidine kinase of two-component system (530 aa)
 
 
  0.985
R2601_13000
Two-component hybrid sensor and regulator (772 aa)
 
  0.970
R2601_23333
Sensory box sensor histidine kianse/response regulator (594 aa)
       
  0.872
R2601_17589
Two-component hybrid sensor and regulator (654 aa)
   
 
  0.773
R2601_24909
Phosphate regulon sensor histidine kinase, putative (346 aa)
   
 
  0.768
R2601_18765
Sensor protein fixL (461 aa)
   
 
  0.709
R2601_15105
Sensory box histidine kinase/response regulator (812 aa)
   
 
  0.705
R2601_05443
Sensor histidine kinase with multiple PAS and a response regulator receiver domain (684 aa)
   
 
  0.696
R2601_25031
Signal transduction histidine kinase (738 aa)
 
  0.695
R2601_04848
Putative sensor histidine kinase protein (749 aa)
 
  0.690
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (9%) [HD]