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R2601_06173 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_06173" - Probable sugar ABC transporter, permease protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_06173Probable sugar ABC transporter, permease protein (324 aa)    
Predicted Functional Partners:
R2601_06163
Putative ABC transporter ATP-binding protein (513 aa)
 
   
    0.973
R2601_06168
Ribose high-affinity ABC transporter permease component (325 aa)
 
       
0.901
R2601_06158
Secreted sugar-binding protein (357 aa)
 
          0.871
R2601_02658
ABC transporter, nucleotide binding/ATPase protein (Sugar) (498 aa)
 
   
    0.805
R2601_00180
ABC sugar transporter, ATPase subunit (501 aa)
 
   
    0.800
R2601_00940
Periplasmic binding protein/LacI transcriptional regulator (316 aa)
 
   
    0.800
R2601_17479
Ribose import ATP-binding protein RbsA ; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system (513 aa)
 
   
    0.799
R2601_01993
Ribose import ATP-binding protein RbsA ; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system (500 aa)
 
   
    0.794
R2601_01130
Ribose ABC transporter, ATP-binding protein (515 aa)
 
   
    0.788
R2601_01563
Ribose ABC transporter permease (335 aa)
   
          0.778
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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