STRINGSTRING
R2601_06238 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_06238" - Fumarylacetoacetase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_06238Fumarylacetoacetase (413 aa)    
Predicted Functional Partners:
R2601_06248
Maleylacetoacetate isomerase (209 aa)
 
  0.997
R2601_06233
Homogentisate 1,2-dioxygenase (446 aa)
 
   
  0.966
R2601_06243
Metallo-beta-lactamase family protein (322 aa)
 
          0.925
R2601_00255
FAD linked oxidase (946 aa)
   
 
    0.826
fumC
Fumarate hydratase class II (464 aa)
     
    0.824
R2601_10759
Succinate dehydrogenase flavoprotein subunit (601 aa)
   
 
    0.814
R2601_09183
3-ketosteroid dehydrogenase, putative (454 aa)
   
 
    0.814
R2601_10769
Succinate dehydrogenase cytochrome b-556 subunit (131 aa)
   
 
    0.803
sdhB
Succinate dehydrogenase iron-sulfur subunit (259 aa)
   
 
    0.797
R2601_17449
Uncharacterized protein (231 aa)
         
  0.787
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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