STRINGSTRING
R2601_06773 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_06773" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_06773Uncharacterized protein (343 aa)    
Predicted Functional Partners:
R2601_06768
Probably methylase/helicase (732 aa)
 
          0.981
R2601_06743
Probably methylase/helicase (793 aa)
 
          0.947
R2601_06778
Uncharacterized protein (310 aa)
 
          0.921
R2601_07563
Uncharacterized protein (712 aa)
 
          0.867
R2601_06603
Uncharacterized protein (723 aa)
 
          0.831
R2601_06323
Putative methylase/helicase (1127 aa)
 
          0.819
R2601_06763
INTEGRASE/RECOMBINASE (334 aa)
              0.783
R2601_06758
No annotation available (451 aa)
              0.783
R2601_06753
Putative integrase (159 aa)
              0.783
R2601_06708
Uncharacterized protein (139 aa)
 
          0.778
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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