STRINGSTRING
R2601_07058 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07058" - Cytochrome c family protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07058Cytochrome c family protein (160 aa)    
Predicted Functional Partners:
R2601_07053
Multicopper oxidase, putative (464 aa)
 
          0.895
R2601_07048
Putative diheme cytochrome c-553 (305 aa)
 
          0.795
R2601_07038
Cytochrome c family protein (152 aa)
 
          0.762
R2601_07043
Cytochrome c, class II (197 aa)
              0.710
R2601_07063
27kDa outer membrane protein (210 aa)
              0.591
R2601_07088
Uncharacterized protein (271 aa)
   
          0.541
R2601_15667
Cytochrome c family protein (144 aa)
 
          0.529
R2601_07368
Cytochrome c family protein (146 aa)
 
          0.527
R2601_07193
Uncharacterized protein (152 aa)
 
          0.523
R2601_07018
Cytochrome c-type biogenesis protein cycH (383 aa)
   
          0.468
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (12%) [HD]