STRINGSTRING
R2601_07123 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07123" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07123Uncharacterized protein (128 aa)    
Predicted Functional Partners:
R2601_07118
Uncharacterized protein (193 aa)
 
          0.602
R2601_07128
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (306 aa)
              0.583
R2601_07098
Multicopper oxidase domain protein (420 aa)
 
          0.522
R2601_07138
Amino acid permease (445 aa)
 
          0.451
R2601_15672
Multicopper oxidase domain protein (457 aa)
              0.450
R2601_07363
Multicopper oxidase domain protein (424 aa)
              0.450
R2601_07328
Copper resistance protein A (579 aa)
              0.450
R2601_07053
Multicopper oxidase, putative (464 aa)
              0.450
R2601_07378
Amino acid permease (442 aa)
 
          0.432
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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