STRINGSTRING
R2601_07183 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07183" - Signal peptidase II in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07183Signal peptidase II ; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (157 aa)    
Predicted Functional Partners:
R2601_07178
Apolipoprotein N-acyltransferase ; Transfers the fatty acyl group on membrane lipoproteins (523 aa)
 
   
  0.951
R2601_07198
Membrane protein (457 aa)
 
     
  0.890
R2601_07188
Uncharacterized protein (260 aa)
 
          0.879
R2601_07173
Uncharacterized protein (55 aa)
              0.863
R2601_07208
Uncharacterized protein (146 aa)
 
          0.822
R2601_07203
SCO1/2 family protein (208 aa)
 
          0.819
R2601_07213
DsbA-like thioredoxin domain protein (219 aa)
 
          0.789
R2601_07128
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (306 aa)
 
   
  0.784
R2601_07193
Uncharacterized protein (152 aa)
              0.784
R2601_07218
Disulfide bond formation protein, DsbB family (140 aa)
 
 
 
  0.778
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]