STRINGSTRING
R2601_07378 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07378" - Amino acid permease in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07378Amino acid permease (442 aa)    
Predicted Functional Partners:
R2601_07383
Uncharacterized protein (128 aa)
 
          0.723
R2601_07393
Uncharacterized protein (228 aa)
 
          0.628
trpD
Anthranilate phosphoribosyltransferase ; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (340 aa)
       
      0.607
R2601_08201
Uncharacterized protein (320 aa)
       
      0.607
R2601_19145
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (308 aa)
   
 
  0.596
R2601_17913
Aspartokinase (412 aa)
     
 
  0.557
R2601_07871
Aspartate kinase (463 aa)
     
 
  0.557
R2601_07328
Copper resistance protein A (579 aa)
 
 
      0.555
R2601_17719
Homoserine dehydrogenase (428 aa)
     
 
  0.548
R2601_25436
Glycosidase (577 aa)
   
  0.548
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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