STRINGSTRING
R2601_07383 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07383" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07383Uncharacterized protein (128 aa)    
Predicted Functional Partners:
R2601_07378
Amino acid permease (442 aa)
 
          0.723
R2601_07393
Uncharacterized protein (228 aa)
 
          0.632
R2601_07398
Uncharacterized protein (85 aa)
              0.570
R2601_07403
Copper-translocating P-type ATPase (682 aa)
              0.566
R2601_07363
Multicopper oxidase domain protein (424 aa)
              0.557
R2601_15672
Multicopper oxidase domain protein (457 aa)
              0.450
R2601_07328
Copper resistance protein A (579 aa)
              0.450
R2601_07098
Multicopper oxidase domain protein (420 aa)
              0.450
R2601_07053
Multicopper oxidase, putative (464 aa)
              0.450
R2601_07138
Amino acid permease (445 aa)
 
          0.426
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (10%) [HD]