STRINGSTRING
R2601_07453 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07453" - Chromosome partitioning protein, ParB in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07453Chromosome partitioning protein, ParB (346 aa)    
Predicted Functional Partners:
R2601_07458
Cobyrinic acid a,c-diamide synthase (246 aa)
 
  0.990
R2601_14710
Chromosome partitioning protein ParA (269 aa)
 
 
  0.878
R2601_07463
Uncharacterized protein (56 aa)
              0.859
R2601_20204
ParA family ATPase (247 aa)
 
 
  0.848
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
 
   
    0.844
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (521 aa)
       
  0.835
R2601_06588
RepA partitioning protein/ATPase, ParA type (381 aa)
 
 
  0.834
R2601_07448
Uncharacterized protein (95 aa)
              0.829
R2601_16695
FtsK/SpoIIIE family protein (1137 aa)
 
   
  0.804
R2601_00325
ATPase, ParA type (391 aa)
 
 
  0.725
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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