STRINGSTRING
R2601_07728 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07728" - Putative trehalase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07728Putative trehalase (482 aa)    
Predicted Functional Partners:
R2601_24624
Putative glucokinase (327 aa)
   
   
    0.964
R2601_05718
Galactose mutarotase ; Converts alpha-aldose to the beta-anomer (329 aa)
   
 
    0.959
R2601_24864
Glucosyl-glycerol-phosphate synthase (504 aa)
   
  0.936
R2601_05413
Putative hydrolase (460 aa)
   
 
  0.799
R2601_05418
Putative hydrolase (727 aa)
 
 
    0.749
R2601_24584
Phosphoglucomutase (544 aa)
     
   
  0.687
R2601_24614
1,4-alpha-glucan branching enzyme (682 aa)
     
 
  0.675
R2601_10097
Putative aldose 1-epimerase protein (290 aa)
 
 
    0.643
pgi
Phosphohexose isomerase (527 aa)
   
   
  0.628
R2601_26726
Putative inner membrane protein (145 aa)
   
          0.626
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]