STRINGSTRING
R2601_07821 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07821" - Cytochrome c family protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07821Cytochrome c family protein (135 aa)    
Predicted Functional Partners:
R2601_13915
Uncharacterized protein (182 aa)
   
          0.749
R2601_26841
Uncharacterized protein (192 aa)
   
          0.745
R2601_11474
Uncharacterized protein (67 aa)
   
          0.724
R2601_25566
Uncharacterized protein (98 aa)
   
          0.712
R2601_24300
Uncharacterized protein (136 aa)
   
          0.710
R2601_11149
Response regulator (122 aa)
   
          0.699
R2601_11274
Uncharacterized protein (223 aa)
   
          0.682
R2601_05108
Uncharacterized protein (63 aa)
   
          0.639
R2601_07826
Uncharacterized protein (498 aa)
              0.619
R2601_25371
Tellurite resistance protein (134 aa)
   
          0.618
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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