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R2601_07876 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07876" - Transcriptional regulator, LysR family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
R2601_07876Transcriptional regulator, LysR family protein (314 aa)    
Predicted Functional Partners:
katG
Peroxidase/catalase ; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (737 aa)
         
  0.851
R2601_02098
Transcriptional regulator (301 aa)
   
          0.704
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (451 aa)
     
 
  0.702
R2601_02603
Transcriptional Regulator, LysR family protein (297 aa)
 
     
  0.685
R2601_10994
Catalase (504 aa)
         
  0.653
R2601_12805
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (214 aa)
         
  0.653
R2601_10042
Thiol-specific antioxidant protein (217 aa)
         
  0.653
R2601_24130
ATP-dependent DNA helicase RecG (696 aa)
   
   
  0.599
R2601_21016
Uncharacterized protein (161 aa)
         
  0.591
R2601_23590
Probable transcription regulator protein (296 aa)
   
     
  0.565
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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