STRINGSTRING
R2601_07906 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07906" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07906Uncharacterized protein (365 aa)    
Predicted Functional Partners:
R2601_07896
Probable sugar ABC transporter, permease protein (357 aa)
 
 
  0.986
R2601_07891
Probable sugar ABC transporter, permease protein (303 aa)
 
 
  0.986
R2601_07901
Probable sugar ABC transporter, ATP-binding protein (503 aa)
 
 
  0.985
R2601_10339
ABC transporter, inner membrane subunit (361 aa)
 
 
  0.911
R2601_10334
Sugar ABC transporter, permease protein (302 aa)
 
 
  0.907
R2601_10344
Sugar ABC transporter, ATP-binding protein (507 aa)
 
 
  0.901
R2601_16495
Putative ABC sugar transporter, inner membrane subunit (348 aa)
 
 
  0.899
R2601_07911
Probable hydrolase protein (451 aa)
 
        0.879
R2601_16490
Putative ABC sugar transporter, inner membrane subunit (315 aa)
 
 
  0.878
R2601_07921
Uncharacterized protein (281 aa)
 
          0.847
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (7%) [HD]