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R2601_07911 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07911" - Probable hydrolase protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07911Probable hydrolase protein (451 aa)    
Predicted Functional Partners:
R2601_21957
Xanthine dehydrogenase family protein, small/large subunits (905 aa)
 
 
  0.936
R2601_07921
Uncharacterized protein (281 aa)
 
          0.902
R2601_07926
Probable oxidoreductase protein (231 aa)
 
          0.883
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
   
 
  0.882
R2601_07906
Uncharacterized protein (365 aa)
 
        0.879
R2601_07896
Probable sugar ABC transporter, permease protein (357 aa)
 
        0.864
R2601_07916
Glutathione S-transferase protein (224 aa)
              0.863
R2601_07891
Probable sugar ABC transporter, permease protein (303 aa)
 
        0.862
R2601_07901
Probable sugar ABC transporter, ATP-binding protein (503 aa)
   
        0.853
R2601_21952
Xanthine dehydrogenase family protein, medium subunit (282 aa)
 
   
    0.842
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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