STRINGSTRING
R2601_07991 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_07991" - Homoserine O-acetyltransferase in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_07991Homoserine O-acetyltransferase (339 aa)    
Predicted Functional Partners:
R2601_27181
O-acetylhomoserine aminocarboxypropyltransferase (425 aa)
 
 
  0.942
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
     
   
  0.906
R2601_17719
Homoserine dehydrogenase (428 aa)
   
 
  0.897
R2601_07996
Choline dehydrogenase (513 aa)
            0.859
R2601_08903
O-succinylhomoserine sulfhydrylase (392 aa)
 
 
  0.836
R2601_17913
Aspartokinase (412 aa)
   
 
  0.817
R2601_27141
Dihydropteroate synthase, DHPS-Homocysteine S-methyltransferase-Cobalamin-dependent methionine (1256 aa)
         
  0.765
R2601_07871
Aspartate kinase (463 aa)
   
 
  0.699
R2601_23318
Inosine-5’-monophosphate dehydrogenase (482 aa)
       
    0.682
R2601_11439
Phosphoserine phosphatase (289 aa)
   
 
  0.659
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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