STRINGSTRING
R2601_08001 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08001" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_08001Uncharacterized protein (400 aa)    
Predicted Functional Partners:
R2601_08006
GlnT-like protein (492 aa)
 
        0.885
R2601_21697
Salicylate hydroxylase (392 aa)
 
  0.813
R2601_19397
2-octaprenyl-6-methoxyphenyl hydroxylase (397 aa)
   
  0.763
R2601_11996
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein (417 aa)
   
  0.763
R2601_05333
Phenol 2-monooxygenase (640 aa)
   
  0.763
R2601_20149
Cytochrome P450 (450 aa)
   
          0.750
R2601_21406
Cyclohexanone monooxygenase (543 aa)
 
  0.746
R2601_02218
Ferredoxin, 2Fe-2S (107 aa)
 
 
  0.745
R2601_08306
Iron-sulfur cluster-binding protein (107 aa)
 
 
  0.744
R2601_26176
Cytochrome P450 family protein (451 aa)
   
          0.697
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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