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R2601_08191 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08191" - Nitrite reductase small subunit in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_08191Nitrite reductase small subunit (110 aa)    
Predicted Functional Partners:
R2601_08196
Nitrate reductase large subunit protein (876 aa)
 
   
  0.991
R2601_08186
BFD-like (2Fe-2S)-binding region (721 aa)
 
 
  0.991
R2601_08181
BFD-like (2Fe-2S)-binding region (80 aa)
 
 
  0.972
R2601_12990
Glutamate synthase, large subunit (1537 aa)
     
 
  0.916
R2601_08201
Uncharacterized protein (320 aa)
              0.887
R2601_07926
Probable oxidoreductase protein (231 aa)
 
  0.857
R2601_18690
Sarcosine oxidase alpha subunit (996 aa)
   
  0.841
R2601_10189
Sarcosine oxidase, alpha subunit family protein (1012 aa)
   
  0.841
R2601_21927
Rieske (2Fe-2S) protein (356 aa)
 
  0.833
R2601_10464
Glutamate dehydrogenase (478 aa)
   
 
  0.831
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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