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bamD protein (Pelagibaca bermudensis) - STRING interaction network
"bamD" - Outer membrane protein assembly factor BamD in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
bamDOuter membrane protein assembly factor BamD ; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (275 aa)    
Predicted Functional Partners:
bamA
Outer membrane protein assembly factor BamA ; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (756 aa)
 
  0.999
R2601_26316
PQQ enzyme repeat family protein (443 aa)
 
  0.989
R2601_25996
Lipoprotein, SmpA/OmlA family (139 aa)
   
 
  0.937
R2601_08246
Recombination protein N ; May be involved in recombinational repair of damaged DNA (553 aa)
 
          0.855
tolB
Protein TolB ; Involved in the TonB-independent uptake of proteins (446 aa)
 
     
  0.796
R2601_18303
Uncharacterized protein (258 aa)
   
          0.755
rpoZ
Transcriptase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (117 aa)
 
      0.752
rpoH
RNA polymerase sigma-32 factor (298 aa)
 
   
  0.740
yidC
Membrane protein YidC ; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (611 aa)
 
   
  0.739
R2601_21547
Penicillin-binding protein 1A (845 aa)
   
      0.729
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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