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R2601_08276 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08276" - Putative uracil-DNA glycosylase in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_08276Putative uracil-DNA glycosylase (316 aa)    
Predicted Functional Partners:
R2601_08271
Putative uracil DNA glycosylase protein (499 aa)
          0.940
R2601_08281
Predicted DNA-binding protein (410 aa)
 
     
  0.839
R2601_24734
Nicotinamide nucleotide repair protein ; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (536 aa)
              0.550
R2601_07703
AAA ATPase (434 aa)
     
      0.528
R2601_14345
Oxidoreductase, Gfo/Idh/MocA family protein (699 aa)
              0.483
argD
Acetylornithine aminotransferase (398 aa)
       
    0.470
uvrC
Excinuclease ABC subunit C ; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5’ and 3’ sides of the lesion. The N-terminal half is responsible for the 3’ incision and the C-terminal half is responsible for the 5’ incision (626 aa)
         
  0.451
gmk
GMP kinase ; Essential for recycling GMP and indirectly, cGMP (213 aa)
              0.451
R2601_24245
Replicative DNA helicase ; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins (494 aa)
              0.451
R2601_24240
Alanine racemase ; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (345 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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