STRINGSTRING
R2601_08291 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08291" - TrkA domain protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_08291TrkA domain protein (592 aa)    
Predicted Functional Partners:
R2601_08296
Ser/Thr protein phosphatase family protein (270 aa)
              0.580
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
   
   
  0.572
R2601_08888
Trk system potassium uptake protein ; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA (482 aa)
 
     
  0.567
R2601_26231
Trk system potassium uptake protein TrkH (504 aa)
 
     
  0.560
R2601_15562
3’(2’),5’-bisphosphate nucleotidase (256 aa)
 
        0.547
R2601_26236
Trk system potassium uptake protein TrkA (458 aa)
 
     
  0.520
R2601_25111
Na+-transporting ATP synthase (451 aa)
         
  0.495
R2601_22362
Phosphoadenylyl-sulfate reductase (thioredoxin) ; Reduction of activated sulfate into sulfite (263 aa)
   
        0.461
ate
Putative arginyl-tRNA--protein transferase ; May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (270 aa)
              0.450
R2601_25106
Potassium uptake protein KtrA, putative (211 aa)
         
  0.434
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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