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R2601_08296 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08296" - Ser/Thr protein phosphatase family protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_08296Ser/Thr protein phosphatase family protein (270 aa)    
Predicted Functional Partners:
R2601_08301
Uncharacterized protein (236 aa)
              0.632
R2601_08306
Iron-sulfur cluster-binding protein (107 aa)
              0.625
R2601_08291
TrkA domain protein (592 aa)
              0.580
R2601_23470
Preprotein translocase, YajC subunit (95 aa)
 
          0.572
R2601_21011
5-formyltetrahydrofolate cyclo-ligase (188 aa)
 
     
  0.557
R2601_25236
Molybdenum cofactor biosynthesis protein A (386 aa)
     
      0.500
R2601_05138
Molybdopterin biosynthesis protein MoeA (720 aa)
     
      0.500
ileS
Isoleucyl-tRNA synthetase ; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile) (996 aa)
   
          0.481
R2601_26281
Putative competence-damaged inducible protein (159 aa)
              0.451
recA
Protein RecA ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (213 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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