STRINGSTRING
R2601_08391 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08391" - Serine O-acetyltransferase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_08391Serine O-acetyltransferase (272 aa)    
Predicted Functional Partners:
R2601_25361
O-acetylserine (Thiol)-lyase, cysteine synthase (342 aa)
 
  0.998
R2601_11439
Phosphoserine phosphatase (289 aa)
   
 
  0.981
R2601_08903
O-succinylhomoserine sulfhydrylase (392 aa)
 
   
  0.852
R2601_27181
O-acetylhomoserine aminocarboxypropyltransferase (425 aa)
 
   
  0.849
glyA
Serine hydroxymethyltransferase ; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (431 aa)
   
 
  0.828
R2601_26746
Probable threonine dehydratase protein (338 aa)
   
 
  0.824
ilvA
Threonine deaminase ; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (414 aa)
   
 
  0.824
R2601_11034
Threonine dehydratase (323 aa)
   
 
  0.823
R2601_01360
Pyridoxal-phosphate dependent enzyme (321 aa)
   
 
  0.823
R2601_17719
Homoserine dehydrogenase (428 aa)
     
 
  0.814
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]