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R2601_08571 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08571" - Transglycosylase, Slt family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_08571Transglycosylase, Slt family protein (653 aa)    
Predicted Functional Partners:
dapA
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (286 aa)
              0.745
R2601_15145
Uncharacterized protein (166 aa)
   
          0.681
R2601_10644
Rod shape-determining protein MreD (379 aa)
 
 
 
  0.642
R2601_10639
Beta-lactamase (625 aa)
 
 
  0.638
R2601_15447
DNA polymerase I (935 aa)
     
 
  0.638
R2601_24430
Sensor histidine kinase (426 aa)
   
          0.636
R2601_21161
Cell division protein FtsW (386 aa)
 
 
 
  0.615
bamD
Outer membrane protein assembly factor BamD ; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (275 aa)
   
        0.599
R2601_10629
Rod shape-determining protein MreC (302 aa)
 
 
 
  0.595
R2601_21987
Possible flagellar motor switch protein (FliG) (350 aa)
 
          0.580
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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