STRINGSTRING
R2601_08646 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08646" - Inositol monophosphatase family protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_08646Inositol monophosphatase family protein (260 aa)    
Predicted Functional Partners:
R2601_08641
PmbA (448 aa)
              0.887
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
 
 
  0.869
R2601_20981
Inositol monophosphatase family protein (269 aa)
   
   
 
0.842
R2601_18970
Inositol-1-monophosphatase, putative (263 aa)
   
   
 
0.833
R2601_15287
Uncharacterized protein (276 aa)
   
          0.770
R2601_05563
Putative oxidoreductase myo-inositol 2-dehydrogenase (331 aa)
   
 
    0.764
lpxK
Lipid A 4’-kinase ; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (329 aa)
              0.705
R2601_08651
Uncharacterized protein (73 aa)
              0.705
rbfA
Ribosome-binding factor A ; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (131 aa)
   
        0.642
R2601_08636
Uncharacterized protein (248 aa)
              0.634
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]