STRINGSTRING
R2601_08746 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08746" - Hemolysin, putative in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_08746Hemolysin, putative (271 aa)    
Predicted Functional Partners:
R2601_08741
Apolipoprotein N-acyltransferase ; Transfers the fatty acyl group on membrane lipoproteins (502 aa)
          0.931
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
   
  0.909
metK
Methionine adenosyltransferase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (392 aa)
 
     
  0.802
trmB
tRNA(m7G46)-methyltransferase ; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (237 aa)
 
          0.799
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (160 aa)
   
        0.703
R2601_07178
Apolipoprotein N-acyltransferase ; Transfers the fatty acyl group on membrane lipoproteins (523 aa)
          0.662
miaB
tRNA-i(6)A37 methylthiotransferase ; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (435 aa)
 
          0.639
R2601_27141
Dihydropteroate synthase, DHPS-Homocysteine S-methyltransferase-Cobalamin-dependent methionine (1256 aa)
       
    0.626
R2601_08756
PhoH family protein (326 aa)
   
        0.621
rpmA
50S ribosomal protein L27 (89 aa)
   
      0.571
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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