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R2601_08918 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_08918" - Iron-sulfur cluster-binding protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_08918Iron-sulfur cluster-binding protein (112 aa)    
Predicted Functional Partners:
R2601_09210
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein (692 aa)
       
  0.936
R2601_22517
Indolepyruvate ferredoxin oxidoreductase (1150 aa)
   
  0.863
R2601_10759
Succinate dehydrogenase flavoprotein subunit (601 aa)
   
  0.860
R2601_09183
3-ketosteroid dehydrogenase, putative (454 aa)
   
  0.860
R2601_01548
Putative dehydrogenase (569 aa)
   
  0.860
R2601_12990
Glutamate synthase, large subunit (1537 aa)
       
  0.818
R2601_10824
Succinyl-CoA ligase [ADP-forming] subunit alpha (294 aa)
   
 
  0.811
R2601_16690
Aminotransferase, classes I and II (393 aa)
 
  0.809
R2601_08928
Helicase, putative (989 aa)
              0.764
R2601_08923
S4 domain protein (124 aa)
              0.764
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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