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R2601_09003 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09003" - Peptidase, M16 family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_09003Peptidase, M16 family protein (420 aa)    
Predicted Functional Partners:
R2601_23208
Cytochrome-c oxidase chain II/c (319 aa)
   
  0.999
R2601_09842
Ubiquinol--cytochrome c reductase, cytochrome c1 (264 aa)
   
  0.983
R2601_09832
Ubiquinol-cytochrome c reductase iron-sulfur subunit ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (191 aa)
   
  0.981
R2601_08993
SURF1 family protein (225 aa)
 
      0.962
R2601_09008
Ribosomal-protein-alanine acetyltransferase, putative (194 aa)
     
      0.925
R2601_08998
Threonine synthase (463 aa)
   
        0.915
R2601_08601
Putative zinc protease (439 aa)
   
0.914
R2601_18058
F-ATPase subunit beta ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (463 aa)
     
  0.880
R2601_13970
F-ATPase subunit beta ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (474 aa)
     
  0.880
R2601_11976
F0F1 ATP synthase subunit beta (117 aa)
     
  0.880
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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