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R2601_09008 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09008" - Ribosomal-protein-alanine acetyltransferase, putative in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_09008Ribosomal-protein-alanine acetyltransferase, putative (194 aa)    
Predicted Functional Partners:
R2601_09003
Peptidase, M16 family protein (420 aa)
     
      0.925
R2601_08993
SURF1 family protein (225 aa)
   
        0.890
R2601_08998
Threonine synthase (463 aa)
              0.887
rpsD
30S ribosomal protein S4 ; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (206 aa)
   
      0.761
R2601_22327
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein (410 aa)
   
 
  0.685
R2601_05613
Aminotransferase, DegT/DnrJ/EryC1/StrS family protein (403 aa)
   
 
  0.685
R2601_08476
GCN5-related N-acetyltransferase (160 aa)
 
 
  0.616
R2601_17898
Acetyltransferase, GNAT family protein (178 aa)
 
   
    0.605
R2601_09013
Uncharacterized protein (275 aa)
              0.564
R2601_08596
Peptidase, M16 family protein (457 aa)
 
 
      0.556
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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