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R2601_09148 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09148" - 3-isopropylmalate dehydratase large subunit in Pelagibaca bermudensis
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
R2601_091483-isopropylmalate dehydratase large subunit ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (463 aa)    
Predicted Functional Partners:
R2601_09143
3-isopropylmalate dehydratase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (194 aa)
  0.999
leuD
Isopropylmalate isomerase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (201 aa)
  0.999
leuB
Beta-IPM dehydrogenase ; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate (367 aa)
 
  0.999
R2601_02068
Probable tartrate dehydrogenase protein (347 aa)
 
  0.999
leuA
Alpha-isopropylmalate synthase ; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (521 aa)
 
  0.999
R2601_23775
2-isopropylmalate synthase (545 aa)
 
  0.998
R2601_12990
Glutamate synthase, large subunit (1537 aa)
 
 
  0.953
R2601_21737
Hydroxymethylglutaryl-CoA lyase (283 aa)
   
  0.948
R2601_03628
Putative hydroxymethylglutaryl-CoA lyase (337 aa)
   
  0.948
R2601_14365
Uncharacterized protein (488 aa)
         
    0.930
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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