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R2601_09153 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09153" - Transcriptional regulator, GntR family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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Textmining
[Homology]
Score
R2601_09153Transcriptional regulator, GntR family protein (268 aa)    
Predicted Functional Partners:
R2601_09183
3-ketosteroid dehydrogenase, putative (454 aa)
 
   
  0.939
R2601_09143
3-isopropylmalate dehydratase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (194 aa)
 
          0.932
R2601_09138
TRAP dicarboxylate transporter, DctP subunit, putative (333 aa)
 
          0.923
R2601_09148
3-isopropylmalate dehydratase large subunit ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (463 aa)
 
          0.892
R2601_09173
Isochorismatase family protein (205 aa)
 
          0.891
R2601_09133
TRAP dicarboxylate transporter, DctQ subunit, putative (168 aa)
 
          0.879
R2601_09158
Tautomerase, putative (185 aa)
 
          0.863
R2601_09163
Hydantoin utilization protein B, putative (564 aa)
 
          0.847
R2601_09178
Isocitrate lyase family protein (288 aa)
 
          0.838
R2601_09128
TRAP dicarboxylate transporter, DctM subunit (435 aa)
 
          0.806
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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