STRINGSTRING
R2601_09235 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09235" - Laccase domain protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_09235Laccase domain protein (251 aa)    
Predicted Functional Partners:
R2601_09245
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (295 aa)
              0.914
R2601_09240
Uncharacterized protein (354 aa)
              0.887
R2601_09250
Uncharacterized protein (81 aa)
              0.753
murC
UDP-N-acetylmuramoyl-L-alanine synthetase ; Cell wall formation (478 aa)
 
        0.742
mraY
UDP-MurNAc-pentapeptide phosphotransferase ; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (360 aa)
 
        0.641
murE
UDP-N-acetylmuramyl-tripeptide synthetase (494 aa)
 
        0.618
R2601_10032
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (215 aa)
 
        0.613
R2601_05593
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (343 aa)
 
        0.611
R2601_10644
Rod shape-determining protein MreD (379 aa)
 
      0.597
R2601_21161
Cell division protein FtsW (386 aa)
 
      0.589
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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