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R2601_09492 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09492" - Putative binding protein dependent transport lipoprotein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_09492Putative binding protein dependent transport lipoprotein (450 aa)    
Predicted Functional Partners:
R2601_09497
Putative integral membrane binding protein dependent transport protein (413 aa)
 
 
  0.976
R2601_09502
Putative integral membrane binding protein dependent transport protein (407 aa)
 
 
  0.967
R2601_09507
Uncharacterized protein (408 aa)
 
          0.868
R2601_09512
ABC transporter ATP-binding protein (341 aa)
       
  0.771
R2601_26531
Probable sorbitol/mannitol transport inner membrane protein (276 aa)
   
 
  0.756
R2601_05553
ABC sugar transporter, inner membrane subunit (277 aa)
   
 
  0.756
R2601_05548
ABC sugar transporter, inner membrane subunit (307 aa)
   
 
  0.721
R2601_05278
ABC sugar (Glycerol) transporter, inner membrane subunit (289 aa)
   
 
  0.721
R2601_12990
Glutamate synthase, large subunit (1537 aa)
         
  0.697
R2601_06223
Putative sugar ABC transporter periplasmic sugar-binding protein ABC TRANSPORTER (362 aa)
       
  0.690
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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