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R2601_09757 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09757" - Mg2+ and Co2+ transporters in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_09757Mg2+ and Co2+ transporters (330 aa)    
Predicted Functional Partners:
R2601_17424
RuBisCO operon transcriptional regulator, CbbR (308 aa)
     
      0.581
R2601_06368
Transcriptional regulator, LysR family protein (305 aa)
     
      0.581
R2601_22512
Transcriptional regulator, LysR family protein (301 aa)
     
      0.496
R2601_21286
Transcriptional regulator, LysR family protein (320 aa)
     
      0.496
R2601_18663
Probable LysR-family transcriptional activator (290 aa)
     
      0.496
R2601_18198
Chromosome replication initiation inhibitor protein (291 aa)
     
      0.496
R2601_02603
Transcriptional Regulator, LysR family protein (297 aa)
     
      0.496
rimK
Probable alpha-L-glutamate ligase (461 aa)
 
          0.459
R2601_25351
Mechanosensitive ion channel family protein (422 aa)
              0.451
R2601_12166
Mechanosensitive ion channel family protein (453 aa)
              0.451
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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