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thiP protein (Pelagibaca bermudensis) - STRING interaction network
"thiP" - Thiamin ABC transporter membrane protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiPThiamin ABC transporter membrane protein (513 aa)    
Predicted Functional Partners:
thiQ
Thiamine import ATP-binding protein ThiQ ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system (232 aa)
 
  0.996
R2601_09857
ABC thiamine transporter, periplasmic substrate-binding protein (302 aa)
 
 
  0.995
R2601_20521
Sn-glycerol-3-phosphate import ATP-binding protein UgpC ; Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system (357 aa)
     
  0.729
R2601_00160
Two-component system sensor protein (807 aa)
   
 
  0.641
R2601_24280
ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein (333 aa)
   
 
  0.589
R2601_20511
Iron-binding periplasmic protein (323 aa)
   
 
  0.589
R2601_19994
Uncharacterized protein (333 aa)
   
 
  0.589
R2601_27001
Probable spermidineputrescine ABC transporter ATP-binding protein (360 aa)
 
 
  0.589
R2601_26536
ABC sorbitol/mannitol transporter, ATPase subunit (333 aa)
 
 
  0.589
R2601_24659
ABC alpha-glucoside transporter, ATPase subunit AglK (363 aa)
 
 
  0.589
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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