STRINGSTRING
gshB protein (Pelagibaca bermudensis) - STRING interaction network
"gshB" - Glutathione synthase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gshBGlutathione synthase (311 aa)    
Predicted Functional Partners:
R2601_17744
Glutamate--cysteine ligase (456 aa)
       
  0.982
R2601_08346
Glutathione-disulfide reductase (485 aa)
 
 
  0.893
R2601_07533
Regulatory protein (450 aa)
 
 
  0.891
R2601_09957
Lipolytic enzyme (299 aa)
              0.866
R2601_13659
Cytosol aminopeptidase family protein (460 aa)
 
 
  0.836
R2601_16575
Glutathione S-transferase family protein (221 aa)
   
   
    0.820
R2601_08978
Glutathione peroxidase (171 aa)
     
 
  0.819
pepA
Leucyl aminopeptidase ; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (491 aa)
 
 
  0.818
R2601_18183
Aminopeptidase N (849 aa)
     
 
  0.812
R2601_19719
Gamma-glutamyltransferase (537 aa)
         
  0.811
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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