STRINGSTRING
R2601_09977 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_09977" - Uncharacterized protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_09977Uncharacterized protein (396 aa)    
Predicted Functional Partners:
glnD
Bifunctional nitrogen sensor protein ; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism (915 aa)
 
          0.874
rsmI
rRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (278 aa)
 
          0.779
R2601_08611
Uncharacterized protein (582 aa)
   
          0.747
ftsQ
Cell division protein FtsQ ; Essential cell division protein (299 aa)
   
          0.721
R2601_09967
UPF0102 protein R2601_09967 (153 aa)
 
          0.684
gshB
Glutathione synthase (311 aa)
              0.675
R2601_05668
Uncharacterized protein (147 aa)
   
          0.650
R2601_13744
Uncharacterized protein (234 aa)
   
          0.649
R2601_18278
Uncharacterized protein (341 aa)
   
          0.634
R2601_12338
Uncharacterized protein (200 aa)
   
          0.620
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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