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R2601_10139 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10139" - Spermidine/putrescine-binding periplasmic protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_10139Spermidine/putrescine-binding periplasmic protein (368 aa)    
Predicted Functional Partners:
R2601_10144
Polyamine-transporting ATPase ; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (366 aa)
 
 
  0.998
R2601_10127
Polyamine ABC transporter, permease protein (396 aa)
 
 
  0.960
R2601_10132
ABC polyamine/opine transporter, inner membrane subunit (562 aa)
 
  0.956
R2601_13284
Putrescine ABC transporter, ATP-binding protein (479 aa)
   
 
  0.865
R2601_11419
Probable ATP-binding component of ABC transporter (355 aa)
   
 
  0.865
R2601_01065
Polyamine ABC transporter (Permease) (257 aa)
   
 
  0.830
R2601_27001
Probable spermidineputrescine ABC transporter ATP-binding protein (360 aa)
   
 
  0.788
R2601_21667
Iron ABC transporter, ATP-binding protein, putative (359 aa)
   
 
  0.788
R2601_20416
Polyamine-transporting ATPase ; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (361 aa)
   
 
  0.788
R2601_17549
Probable ATP-binding component of ABC transporter (341 aa)
   
 
  0.788
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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