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R2601_10214 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10214" - Cytochrome c-type biogenesis protein CycH in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_10214Cytochrome c-type biogenesis protein CycH (412 aa)    
Predicted Functional Partners:
R2601_25266
Cytochrome c maturation protein, CcmH (152 aa)
 
 
  0.942
R2601_25271
Cytochrome c-type biogenesis protein CcmF (655 aa)
 
 
  0.939
R2601_07003
Cytochrome c biogenesis factor (666 aa)
 
 
  0.917
R2601_07013
CycL protein (157 aa)
 
 
  0.906
ccmE
Heme chaperone CcmE ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (149 aa)
 
   
  0.880
R2601_23500
Heme exporter protein B ; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (218 aa)
 
   
  0.867
ccmA
Heme exporter protein A ; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system (204 aa)
 
   
  0.775
R2601_10224
Uncharacterized protein (75 aa)
              0.742
R2601_10219
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (158 aa)
              0.742
R2601_15070
HemY domain protein (511 aa)
   
          0.725
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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