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R2601_10244 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10244" - Chorismate mutase family protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
R2601_10244Chorismate mutase family protein (391 aa)    
Predicted Functional Partners:
dusA
tRNA-dihydrouridine synthase A ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs (315 aa)
 
 
      0.818
R2601_00795
Replication protein (434 aa)
 
   
  0.632
R2601_00800
Replication protein, putative (365 aa)
   
          0.591
R2601_07468
Conjugal transfer antirestriction protein (293 aa)
 
          0.561
R2601_10127
Polyamine ABC transporter, permease protein (396 aa)
   
        0.529
R2601_10234
Membrane protein (273 aa)
   
        0.524
R2601_19280
Uncharacterized protein (233 aa)
     
   
  0.472
dnaA
Chromosomal replication initiator protein DnaA ; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (451 aa)
     
   
  0.472
hisS
Histidyl-tRNA synthetase (490 aa)
     
      0.457
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (215 aa)
         
  0.457
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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