STRINGSTRING
R2601_10264 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10264" - No annotation available in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_10264No annotation available (115 aa)    
Predicted Functional Partners:
R2601_10259
No annotation available (110 aa)
          0.934
R2601_20666
ISSpo7, transposase (129 aa)
          0.891
R2601_15840
ISSpo7, transposase (141 aa)
          0.780
R2601_07288
Truncated transposase (119 aa)
 
          0.775
R2601_07258
Putative transposase (109 aa)
   
          0.775
R2601_21396
ISSpo7, transposase (82 aa)
          0.765
R2601_20726
ISSpo7, transposase (110 aa)
          0.754
R2601_10254
Transposase (341 aa)
              0.745
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (6%) [HD]