STRINGSTRING
R2601_10369 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10369" - DNA-directed DNA polymerase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_10369DNA-directed DNA polymerase (1174 aa)    
Predicted Functional Partners:
R2601_17304
DNA polymerase III subunits gamma and tau (588 aa)
 
  0.998
R2601_14420
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (372 aa)
   
  0.996
R2601_19599
DNA polymerase III subunit delta (372 aa)
   
  0.994
R2601_15447
DNA polymerase I (935 aa)
   
  0.991
R2601_12473
Uncharacterized protein (342 aa)
     
  0.965
R2601_24355
DNA polymerase III subunit chi (152 aa)
     
    0.961
R2601_14665
Putative DNA polymerase III, epsilon subunit and related 3’-5’ exonuclease (229 aa)
     
  0.956
R2601_25146
Single-stranded DNA-binding protein ; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (171 aa)
   
 
  0.946
R2601_22721
Single-stranded DNA-binding protein ; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (159 aa)
   
 
  0.946
rpoB
Transcriptase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1378 aa)
 
   
  0.914
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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