STRINGSTRING
R2601_10404 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10404" - Heat shock protein, Hsp20 family in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_10404Heat shock protein, Hsp20 family (136 aa)    
Predicted Functional Partners:
R2601_10409
Uncharacterized protein (75 aa)
              0.887
R2601_14000
ATP-dependent Clp protease, ATP-binding subunit ClpA (776 aa)
 
 
  0.830
R2601_22062
Probable ClpA/B-type protease (914 aa)
   
 
  0.801
R2601_16070
Probable ClpA/B-type chaperone (889 aa)
   
 
  0.801
clpB
Chaperone protein ClpB ; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE (871 aa)
   
 
  0.801
dnaK
Heat shock protein 70 ; Acts as a chaperone (642 aa)
   
 
  0.727
dnaJ
Chaperone protein DnaJ ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] (385 aa)
   
 
  0.707
R2601_08036
DnaJ domain protein (209 aa)
 
   
  0.620
R2601_07728
Putative trehalase (482 aa)
     
      0.613
R2601_10399
Uncharacterized protein (74 aa)
              0.608
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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