STRINGSTRING
R2601_10484 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10484" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_10484Uncharacterized protein (163 aa)    
Predicted Functional Partners:
R2601_10489
Prephenate dehydratase (277 aa)
              0.783
R2601_10634
Uncharacterized protein (179 aa)
   
          0.774
R2601_26896
Uncharacterized protein (76 aa)
   
          0.766
R2601_26991
Uncharacterized protein (311 aa)
   
          0.763
R2601_21642
TRAP transporter, DctM subunit, putative (784 aa)
   
          0.758
R2601_18508
Uncharacterized protein (101 aa)
   
          0.755
R2601_19559
Uncharacterized protein (311 aa)
   
          0.754
R2601_21637
Uncharacterized protein (309 aa)
   
          0.751
R2601_11169
Uncharacterized protein (80 aa)
   
          0.746
R2601_26386
Uncharacterized protein (87 aa)
   
          0.745
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (8%) [HD]