STRINGSTRING
R2601_10539 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10539" - Cytochrome c oxidase, cbb3-type, subunit I in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_10539Cytochrome c oxidase, cbb3-type, subunit I (537 aa)    
Predicted Functional Partners:
R2601_10544
Cytochrome c oxidase, cbb3-type, subunit II (242 aa)
  0.999
R2601_10554
Cbb3-type cytochrome c oxidase subunit ; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex (293 aa)
 
  0.999
R2601_10549
Cytochrome c oxidase, cbb3-type, subunit IV (66 aa)
 
   
  0.986
R2601_10569
Iron-sulfur-binding protein, RdxA/RdxB/FixG family (477 aa)
 
   
  0.918
R2601_09837
Cytochrome b ; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (447 aa)
 
 
  0.882
R2601_23208
Cytochrome-c oxidase chain II/c (319 aa)
   
 
  0.877
R2601_10584
Copper-translocating P-type ATPase (580 aa)
 
     
  0.835
R2601_10519
Coproporphyrinogen-III oxidase (442 aa)
 
     
  0.818
R2601_10574
FixH protein, putative (153 aa)
 
     
  0.817
R2601_09842
Ubiquinol--cytochrome c reductase, cytochrome c1 (264 aa)
     
 
  0.813
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (15%) [HD]