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R2601_10599 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10599" - Transcriptional regulator, AsnC family protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_10599Transcriptional regulator, AsnC family protein (152 aa)    
Predicted Functional Partners:
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
   
  0.831
R2601_10604
Alanine dehydrogenase (370 aa)
              0.747
R2601_18985
Bifunctional protein PutA ; Oxidizes proline to glutamate for use as a carbon and nitrogen source (1142 aa)
   
   
  0.678
pqqE
Pyrroloquinoline quinone biosynthesis protein E (369 aa)
   
 
  0.669
R2601_02838
Uncharacterized protein (278 aa)
   
 
  0.669
R2601_10594
Putative alcohol dehydrogenase protein (526 aa)
              0.564
R2601_19145
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (308 aa)
       
  0.562
R2601_08853
Transcriptional regulator, AsnC family protein (152 aa)
   
          0.539
R2601_24749
Uncharacterized protein (400 aa)
         
  0.465
R2601_21537
Aminotransferase, classes I and II (381 aa)
         
  0.465
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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