STRINGSTRING
R2601_10624 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10624" - Rod shape-determining protein MreB in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_10624Rod shape-determining protein MreB (341 aa)    
Predicted Functional Partners:
R2601_10629
Rod shape-determining protein MreC (302 aa)
 
 
  0.995
R2601_10639
Beta-lactamase (625 aa)
 
 
  0.985
R2601_10644
Rod shape-determining protein MreD (379 aa)
 
 
  0.984
ftsZ
Cell division protein FtsZ ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (564 aa)
     
 
  0.929
R2601_21126
Penicillin-binding protein (596 aa)
 
 
  0.895
R2601_21161
Cell division protein FtsW (386 aa)
 
 
  0.895
ftsA
Cell division protein FtsA ; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring (443 aa)
   
 
  0.891
R2601_10634
Uncharacterized protein (179 aa)
              0.792
R2601_20179
Site-determining protein (282 aa)
     
 
  0.760
R2601_10649
D-isomer specific 2-hydroxyacid dehydrogenase family protein (310 aa)
   
        0.757
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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