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R2601_10674 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_10674" - Alcohol dehydrogenase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_10674Alcohol dehydrogenase (428 aa)    
Predicted Functional Partners:
R2601_13734
Methylmalonyl-CoA epimerase (134 aa)
   
 
  0.932
R2601_10679
Methylmalonyl-CoA mutase (665 aa)
 
     
  0.928
R2601_10779
Uncharacterized protein (343 aa)
 
 
  0.908
R2601_12835
Isobutyryl-CoA dehydrogenase (562 aa)
 
 
  0.886
R2601_18553
Enoyl-CoA hydratase/isomerase-3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein (666 aa)
 
 
  0.869
R2601_17988
Enoyl-CoA hydratase (634 aa)
 
 
  0.869
R2601_21957
Xanthine dehydrogenase family protein, small/large subunits (905 aa)
         
  0.835
R2601_10107
MaoC domain protein (151 aa)
 
 
  0.827
R2601_12540
Beta subunit of citrate lyase (319 aa)
 
   
  0.762
R2601_19502
Propionyl-CoA carboxylase, beta subunit (510 aa)
       
  0.738
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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